References (GeneNest, SpliceNest, SYSTERS)

GeneNest

• Krause,A., Haas,S.A., Coward,E., Vingron,M. (2002) SYSTERS, GeneNest, SpliceNest: Exploring sequence space from genome to protein.
  Nucleic Acids Res., 30 (1), 299-300
  

• Haas,S.A., Beissbarth,T., Rivals,E., Krause,A., Vingron,M. (2000)
  GeneNest: automated generation and visualization of gene indices.
  Trends Genet., 16 (11), 521-523
  

• Haas,S., Kirby,S., Peters,M., Toussaint,B., Lehrach,H., Poustka,A., Vingron,M., Korn,B. (1998)
  Consensus Sequence Database of all human Genes and ESTs; Minimal Set of Human EST clones available.
  DHGP Xpress 3/1998

SpliceNest

• Gupta,S., Zink,D., Korn,B., Vingron,M. and Haas,S.A. (2004) Genome wide identification and classification of alternative splicing based on EST data.
  Bioinformatics, in press
  
  
• Coward,E., Haas,S.A. and Vingron,M. (2002)
  SpliceNest: visualization of gene structure and alternative splicing based on EST clusters.
  Trends Genet. 18 (1), 53-55

SYSTERS

• Krause,A., Stoye,J., Vingron,M. (2000)
  The SYSTERS Protein Sequence Cluster Set.
  Nucleic Acids Res. 28 (1), 270-272

• Krause,A., Nicodème,P., Bornberg-Bauer,E., Rehmsmeier,M., Vingron,M. (1999)
  WWW-Access to the SYSTERS Protein Sequence Cluster Set.
  Bioinformatics 15 (3), 262-263

• Krause,A. and Vingron,M. (1998)
  A set-theoretic approach to database searching and clustering.
  Bioinformatics 14 (5), 430-438

• Krause,A. and Vingron,M. (1997)
  A new method for database searching and clustering
  Proceedings of the 8th Workshop on Genome Informatics, Tokyo, Japan